MS Biotechnology  ·  Portsmouth  ·  2026

AmandeepSahni

Molecular researcher. Global health thinker. From CRISPR labs to LMIC market access — science with purpose.

CRISPR / Cas9
TTR Amyloidosis
Market Access
HEOR · LMIC
Clinical Research
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Portsmouth, UK  ·  Graduating Sept 2026
CRISPR / Cas9
TTR Amyloidosis
sgRNA42
T7E1 Cleavage
ICE Analysis
CD Spectroscopy
SDS-PAGE
Market Access
LMIC Healthcare
LNP Drug Delivery
Protein Folding
CRISPR / Cas9
TTR Amyloidosis
sgRNA42
T7E1 Cleavage
ICE Analysis
CD Spectroscopy
SDS-PAGE
Market Access
LMIC Healthcare
LNP Drug Delivery
Protein Folding
001 — Profile

Who I Am.

I am an MS Biotechnology candidate at the University of Portsmouth — a researcher who thinks in systems, from molecule to market. My work spans CRISPR/Cas9 functional modelling of the human BTBD6 p.Gln194* variant in Xenopus tropicalis, and transthyretin (TTR) amyloidosis — investigating how the L55P mutation drives protein misfolding.

Before my MS, I worked inside India's biotech and healthcare sector, watching how supply constraints, procurement politics, and affordability gaps determine what medicines reach patients. That gave me a ground-level understanding of LMIC access barriers — not just in policy papers.

I hold a Governor's Award from The Bharat Scouts and Guides, and I was accepted to present a flash talk at the Cancer Prevention Research Conference 2026 in Atlanta on AI-driven breast cancer risk prediction.

2
Active MS research projects running simultaneously
CRISPR
sgRNA42 · T7E1 confirmed · 2–10% indels
TTR
Amyloidosis · L55P mutation · CD spectroscopy
LMIC
Market access · HEOR · global health
2026
Graduating September · open UK-wide
University of Portsmouth
Lovely Professional University
Electro Crafts Biolabs
Biotech Park Lucknow
CSIR-IIIM Jammu
Diamond Light Source
Atlanta 2026
Governor's Award
Grant Thornton
University of Portsmouth
Lovely Professional University
Electro Crafts Biolabs
Biotech Park Lucknow
CSIR-IIIM Jammu
Diamond Light Source
Atlanta 2026
Governor's Award
Grant Thornton
002 — CRISPR Research

Genome Editing.

BTBD6 is a protein required to kickstart neurogenesis. When lost, a key repressor called PLZF cannot be cleared — and neurons fail to differentiate properly.

The patient variant p.Gln194* effectively switches BTBD6 off. No in vivo model existed for this specific variant — so we built one using CRISPR/Cas9 in Xenopus tropicalis.

My guide RNA (sgRNA42) successfully edited the gene — confirmed by T7E1 cleavage and Sanger sequencing. Crispant embryos showed microcephaly and body axis defects.

The key finding: a second guide RNA (sgRNA27) showed the same abnormalities despite 0% detectable editing — suggesting even tiny undetectable edits early in development can affect the whole embryo.

sgRNA42 — Editing Confirmed ✓
2–10% indels · 520 + 160 bp cleavage bands · mosaic editing
~29%
Abnormal
~71%
Normal
sgRNA27 — No Editing Detected ✗
0% indels by T7E1 & Sanger · yet phenotypic abnormalities observed
Key scientific observation: sub-threshold mosaic editing may affect critical cell populations even below detection limits.
003 — Dissertation Research

Protein Stability.

Research Question
L55P Mutation
How does L55P disrupt the native TTR tetramer to drive amyloidogenesis? (PDB: 1F41 → 6SDZ)
Pathogenic vs Protective
L55P vs T119M
L55P: severe destabilisation, C-D loop disruption · T119M: kinetic stabilisation, natural suppressor
Expression & Purification
E. coli BL21(DE3)
IPTG induction → AmSO₄ → Sepharose Q (pH 7.5) → Superdex 75 SEC
Characterisation
CD · SDS-PAGE
Circular dichroism to monitor secondary structure · SDS-PAGE and native PAGE analysis
Supervisor
Dr Steve Wood
Faculty of Science & Health · University of Portsmouth · 2025–2026
Feature L55P — Pathogenic T119M — Protective
Protein StabilityLow — Highly UnstableHigh — Kinetically Stabilised
Misfolding SpeedFast — rapid dissociationSlow — suppressed
Effect on BodyOrgan DamageHealthy Function

* Expected results based on experimental design — data collection in progress · Supervisor: Dr Steve Wood

004 — Bench Methods

T7E1 Assay.

T7E1 Mismatch Cleavage · BTBD6 · sgRNA42
~680 bp uncut    ~520 bp cleavage (sgRNA42)    ~160 bp cleavage (sgRNA42)    sgRNA27: no cleavage

PCR products were re-annealed then digested with T7E1 (NEB, 37°C, 15 min). Fragments resolved on 1–2% agarose gel with SYBR Safe.

sgRNA42: Clear cleavage bands at ~520 bp and ~160 bp across all four crispant lanes — confirming CRISPR-induced indels.

sgRNA27: Only the 680 bp uncut band — no cleavage. Yet crispant tadpoles still showed abnormal development, pointing to sub-threshold mosaic editing.

005 — All Projects

What I'm Investigating.

01
MS · Dr Annie Godwin · 2025–26
CRISPR/Cas9 Genome Editing in Xenopus tropicalis
Modelling human BTBD6 p.Gln194* in vivo. sgRNA42 confirmed editing (2–10% indels). sgRNA27 showed 0% indels yet phenotypic abnormalities — sub-threshold mosaicism.
02
Dissertation · Dr Steve Wood · 2025–26
TTR Protein Stability & Amyloidogenesis
How L55P destabilises the native TTR tetramer (PDB: 1F41). E. coli BL21(DE3) expression, Sepharose Q purification, CD spectroscopy, SDS-PAGE.
03
Conference Flash Talk · Atlanta 2026
AI-Driven Breast Cancer Risk Prediction
Flash talk at Cancer Prevention Research Conference 2026. Machine learning for population-scale early cancer risk stratification.
04
B.Tech Research · LPU
Green Synthesis of β-Fe₂O₃ Nanoparticles
Using Erythrina variegata plant extract as biological reducing agent. Photocatalytic, antimicrobial, and antioxidant biomedical applications.
05
Market Access · HEOR · Global Health
TTR Amyloidosis — Evidence Gap Analysis
Real-world evidence gap for tafamidis in wild-type TTR amyloidosis — reframed as a market access and HEOR challenge for LMIC health systems.
06
Structural Biology · Diamond Light Source · 2025
Synchrotron Protein Crystallography
Observed protein crystallography at Diamond Light Source, Harwell. Communicated structural biology findings to non-specialist audiences.
006 — Skills & Tools

What I Bring.

Molecular Biology
  • CRISPR / Cas9
  • PCR & Gel Electrophoresis
  • DNA/RNA Extraction & Sequencing
  • Cell Culture · Expression Cloning
  • NanoDrop · T7E1 · ICE Analysis
Protein & Biophysics
  • CD Spectroscopy
  • SDS-PAGE · Native PAGE
  • Sepharose Q · Superdex 75 SEC
  • E. coli BL21(DE3) Expression
  • Spectrophotometry · HPLC
Bioinformatics & Data
  • Python — Genomics Certified
  • Excel — Advanced (Grant Thornton)
  • Biopython · MATLAB
  • GenBank · Swiss-Prot · inDelphi
  • SAP · Ariba · Zoho CRM
Market Access & HEOR
  • LMIC Healthcare Systems
  • Evidence Gap Analysis
  • Health Economics · Literature Synthesis
  • Stakeholder Mapping
Communication
  • Scientific Poster Design
  • International Conference Speaker
  • Structured Report Writing
  • Stakeholder Briefings
Languages
    007 — Experience

    Where I've Worked.

    Apr – Jun 2025
    Electro Crafts Biolabs
    Faridabad, India
    Biotech Sales & Technical Support Executive
    • Managed pharmaceutical, hospital, and research institution clients across North India — translating complex product data into evidence-based purchasing recommendations under LMIC budget constraints
    • Built relationships with hospital procurement officers and clinical scientists navigating cost-sensitive healthcare markets
    • Used SAP, Ariba, and Zoho CRM to track pipeline and generate client reports
    Feb 2025 · 1 month
    CSIR-IIIM
    Jammu, India · On-site
    Trainee — Synthesis of Key Intermediates & APIs
    • Hands-on expertise in synthesis of key intermediates and Active Pharmaceutical Ingredients (APIs) using advanced laboratory techniques
    • Executed organic synthesis and process development experiments, contributing to improvements in experimental workflows
    • Acquired insight into pharmaceutical manufacturing practices, bridging theoretical knowledge with industry-relevant applications
    Jun – Jul 2022
    Biotech Park
    Lucknow, India
    Molecular Biology Research Intern
    • Hands-on DNA extraction, nanodrop quantification, and gel electrophoresis from bacterial and plant sources
    • Worked under structured SOPs; maintained meticulous experimental records throughout
    008 — Education

    Academic Foundation.

    2025 — September 2026
    MS Biotechnology
    University of Portsmouth · UK
    • Dissertation: TTR protein stability & amyloidogenesis — supervised by Dr Steve Wood
    • Research: CRISPR/Cas9 genome editing in Xenopus tropicalis — supervised by Dr Annie Godwin
    • Flash talk: AI breast cancer risk prediction · Cancer Prevention Research Conference 2026 · Atlanta
    • Modules: Drug Discovery, Molecular Biology Techniques, Engineering Animals, Research Methods
    • Visit: Diamond Light Source synchrotron · Harwell
    2020 — 2024
    B.Tech Biotechnology
    Lovely Professional University · Punjab, India
    • Research: Green synthesis of β-Fe₂O₃ nanoparticles using Erythrina variegata
    • Genomic DNA extraction & BSA quantification using Lowry's method
    • ICBB-2022 International Conference on Bioengineering & Biosciences · Phagwara
    • CSIR-IIIM apprenticeship: API synthesis & pharmaceutical manufacturing (Feb 2025)
    • Certifications: Python for Genomic Data Science · Analytical Excel — Grant Thornton
    009 — Recognition

    Beyond the Lab.

    01
    Governor's Award — The Bharat Scouts and Guides
    State-level recognition for outstanding leadership, discipline, and community service. Led diverse teams through structured programmes and advanced training camps.
    02
    International Flash Talk — Cancer Prevention Research Conference 2026 · Atlanta
    Accepted for AI-driven breast cancer risk prediction research. High-stakes science communication to an international oncology audience.
    010 — Contact